Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAH44234.1 | BAH45450.1 | BBR47_32570 | BBR47_44730 | Putative non-ribosomal peptide synthetase. | Hypothetical protein. | 0.481 |
BAH44234.1 | BAH46688.1 | BBR47_32570 | BBR47_57110 | Putative non-ribosomal peptide synthetase. | Hypothetical protein. | 0.432 |
BAH44234.1 | BAH46804.1 | BBR47_32570 | BBR47_58270 | Putative non-ribosomal peptide synthetase. | Hypothetical protein. | 0.732 |
BAH44234.1 | clpC | BBR47_32570 | BBR47_01880 | Putative non-ribosomal peptide synthetase. | Negative regulator of genetic competence; Belongs to the ClpA/ClpB family. | 0.429 |
BAH44234.1 | dnaK | BBR47_32570 | BBR47_20300 | Putative non-ribosomal peptide synthetase. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.481 |
BAH44234.1 | groEL | BBR47_32570 | BBR47_05260 | Putative non-ribosomal peptide synthetase. | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.496 |
BAH44234.1 | grpE | BBR47_32570 | BBR47_20290 | Putative non-ribosomal peptide synthetase. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.404 |
BAH44234.1 | hscC | BBR47_32570 | BBR47_19150 | Putative non-ribosomal peptide synthetase. | Chaperone protein HscC; Belongs to the heat shock protein 70 family. | 0.481 |
BAH44234.1 | htpG | BBR47_32570 | BBR47_14700 | Putative non-ribosomal peptide synthetase. | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | 0.441 |
BAH45450.1 | BAH44234.1 | BBR47_44730 | BBR47_32570 | Hypothetical protein. | Putative non-ribosomal peptide synthetase. | 0.481 |
BAH45450.1 | BAH46688.1 | BBR47_44730 | BBR47_57110 | Hypothetical protein. | Hypothetical protein. | 0.419 |
BAH45450.1 | BAH46804.1 | BBR47_44730 | BBR47_58270 | Hypothetical protein. | Hypothetical protein. | 0.893 |
BAH45450.1 | clpC | BBR47_44730 | BBR47_01880 | Hypothetical protein. | Negative regulator of genetic competence; Belongs to the ClpA/ClpB family. | 0.889 |
BAH45450.1 | groEL | BBR47_44730 | BBR47_05260 | Hypothetical protein. | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.911 |
BAH45450.1 | grpE | BBR47_44730 | BBR47_20290 | Hypothetical protein. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.930 |
BAH45450.1 | htpG | BBR47_44730 | BBR47_14700 | Hypothetical protein. | Heat shock protein HtpG; Molecular chaperone. Has ATPase activity. | 0.959 |
BAH46688.1 | BAH44234.1 | BBR47_57110 | BBR47_32570 | Hypothetical protein. | Putative non-ribosomal peptide synthetase. | 0.432 |
BAH46688.1 | BAH45450.1 | BBR47_57110 | BBR47_44730 | Hypothetical protein. | Hypothetical protein. | 0.419 |
BAH46688.1 | BAH46804.1 | BBR47_57110 | BBR47_58270 | Hypothetical protein. | Hypothetical protein. | 0.696 |
BAH46688.1 | dnaK | BBR47_57110 | BBR47_20300 | Hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.419 |
page 1 of 5