STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR95243.1RND family efflux transporter, MFP subunit. (476 aa)    
Predicted Functional Partners:
SFR95255.1
Putative ABC transport system permease protein.
 
  
 0.976
SFR95248.1
Putative ABC transport system ATP-binding protein.
 
 
 0.951
SFS16045.1
Putative ABC transport system permease protein.
 
  
 0.903
SFR95260.1
Hypothetical protein.
  
 0.892
SFR95265.1
Hypothetical protein.
  
 0.892
SFS21751.1
ABC-type antimicrobial peptide transport system, permease component.
 
  
 0.841
SFR96271.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.821
SFS06053.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.814
SFR89636.1
Hypothetical protein.
  
 0.745
SFR89647.1
Hypothetical protein.
  
 0.745
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.