STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR96217.1Uncharacterized protein, contains a NRPS condensation (elongation) domain. (651 aa)    
Predicted Functional Partners:
SFR91521.1
Condensation domain-containing protein.
  
 
 0.927
SFR96221.1
Acetyl esterase/lipase.
 
  0.852
SFR88713.1
Predicted TIM-barrel enzyme.
  
  
 0.722
SFR88699.1
Uncharacterized protein, UPF0261 family.
  
  
 0.679
SFS23342.1
Triacylglycerol lipase.
  
  
  0.674
SFS03679.1
Amino acid adenylation domain-containing protein.
  
 
 0.638
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
    
  0.591
SFR96212.1
D-cysteine desulfhydrase.
 
   
 0.588
SFR94729.1
Alanine racemase.
  
 
  0.542
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
  0.542
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
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