STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS10224.1Tripartite ATP-independent transporter solute receptor, DctP family. (359 aa)    
Predicted Functional Partners:
SFS10203.1
TRAP transporter, DctM subunit.
  
 0.911
SFS23060.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
 0.807
SFR90322.1
TRAP transporter, DctM subunit.
 
  
 0.788
SFS05121.1
TRAP transporter, DctM subunit.
 
  
 0.788
SFS05576.1
TRAP transporter, DctM subunit.
 
  
 0.788
SFS22730.1
TRAP transporter, DctM subunit.
 
  
 0.788
SFS23061.1
TRAP transporter, DctM subunit.
 
  
 0.788
SFR84575.1
TRAP transporter, DctM subunit.
 
  
 0.787
SFS05221.1
TRAP transporter, DctM subunit.
 
  
 0.787
SFS05301.1
C4-dicarboxylate transporter, DctM subunit.
 
  
 0.787
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.