STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS11060.1ABC-2 type transport system ATP-binding protein. (323 aa)    
Predicted Functional Partners:
SFS11050.1
ABC-2 type transport system permease protein.
 
  
 0.954
SFR95169.1
ABC-2 type transport system permease protein.
 
 0.935
SFS11045.1
Protein of unknown function.
 
     0.902
SFR95164.1
ABC-2 type transport system permease protein.
 
  
 0.799
SFR93836.1
ABC-2 type transporter.
  
 
 0.795
SFS04548.1
ABC-2 family transporter protein.
  
 0.725
SFS21500.1
ABC-2 type transport system permease protein.
  
 0.724
SFS13107.1
Amino acid ABC transporter membrane protein, PAAT family.
    
 0.655
SFR95159.1
Protein of unknown function.
 
     0.623
SFS22693.1
ABC-2 type transport system permease protein.
  
 
 0.619
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
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