SFS22857.1 protein (Clostridium citroniae) - STRING interaction network

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Score

SFS22857.1

DNA-binding transcriptional regulator, MerR family. (283 aa)

Predicted Functional Partners:

rpoB

0.883

rpoA

0.880

rpoC

0.878

SFS20491.1

0.878

rpoD

0.873

SFS20068.1

0.873

SFS21255.1

0.873

rpoD-2

0.873

accD

0.830

SFS22853.1

0.762

Your Current Organism:

Clostridium citroniae

NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFS20068.1	SFS20491.1	SAMN05216568_10667	SAMN05216568_106235	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.894
SFS20068.1	SFS22857.1	SAMN05216568_10667	SAMN05216568_11097	RNA polymerase primary sigma factor.	DNA-binding transcriptional regulator, MerR family.	0.873
SFS20068.1	rpoA	SAMN05216568_10667	SAMN05216568_112111	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.933
SFS20068.1	rpoB	SAMN05216568_10667	SAMN05216568_101541	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.936
SFS20068.1	rpoC	SAMN05216568_10667	SAMN05216568_101542	RNA polymerase primary sigma factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.930
SFS20491.1	SFS20068.1	SAMN05216568_106235	SAMN05216568_10667	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase primary sigma factor.	0.894
SFS20491.1	SFS21255.1	SAMN05216568_106235	SAMN05216568_10779	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.894
SFS20491.1	SFS22857.1	SAMN05216568_106235	SAMN05216568_11097	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-binding transcriptional regulator, MerR family.	0.878
SFS20491.1	rpoA	SAMN05216568_106235	SAMN05216568_112111	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SFS20491.1	rpoB	SAMN05216568_106235	SAMN05216568_101541	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SFS20491.1	rpoC	SAMN05216568_106235	SAMN05216568_101542	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
SFS20491.1	rpoD	SAMN05216568_106235	SAMN05216568_104128	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.894
SFS20491.1	rpoD-2	SAMN05216568_106235	SAMN05216568_10792	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.894
SFS21255.1	SFS20491.1	SAMN05216568_10779	SAMN05216568_106235	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.894
SFS21255.1	SFS22857.1	SAMN05216568_10779	SAMN05216568_11097	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-binding transcriptional regulator, MerR family.	0.873
SFS21255.1	rpoA	SAMN05216568_10779	SAMN05216568_112111	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.943
SFS21255.1	rpoB	SAMN05216568_10779	SAMN05216568_101541	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963
SFS21255.1	rpoC	SAMN05216568_10779	SAMN05216568_101542	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.935
SFS22853.1	SFS22857.1	SAMN05216568_11093	SAMN05216568_11097	Hypothetical protein.	DNA-binding transcriptional regulator, MerR family.	0.762
SFS22857.1	SFS20068.1	SAMN05216568_11097	SAMN05216568_10667	DNA-binding transcriptional regulator, MerR family.	RNA polymerase primary sigma factor.	0.873