STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS22976.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
SFS22977.1
Protein of unknown function.
       0.773
SFS22679.1
Hypothetical protein.
  
     0.762
SFS23088.1
Hypothetical protein.
  
     0.710
SFS05682.1
PrcB C-terminal.
  
     0.707
SFR94457.1
Hypothetical protein.
  
     0.692
zapA
Cell division protein ZapA.
  
     0.689
SFS23183.1
Putative membrane protein, TIGR04086 family.
  
     0.670
SFR84017.1
Hypothetical protein.
  
     0.666
SFR94440.1
Fur family transcriptional regulator, ferric uptake regulator.
  
     0.661
SFR89931.1
Hypothetical protein.
  
     0.635
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.