STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS23118.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
glf
UDP-galactopyranose mutase.
 
 
 0.899
SFS23116.1
Glycosyl transferase family 2.
  
 
 0.838
SFR95560.1
Hypothetical protein.
 
 
 0.835
SFS23117.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.825
SFS23122.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
  
 
 0.789
SFS23119.1
Lipopolysaccharide transport system permease protein.
  
  
 0.780
SFS23120.1
Lipopolysaccharide transport system ATP-binding protein.
  
 
 0.772
SFS22701.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.769
SFS23121.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.752
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.697
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
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