Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR87248.1 | SFS11376.1 | SAMN05216568_101339 | SAMN05216568_103257 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.991 |
SFR87248.1 | SFS17181.1 | SAMN05216568_101339 | SAMN05216568_104463 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.992 |
SFR87248.1 | SFS17246.1 | SAMN05216568_101339 | SAMN05216568_104476 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | 0.999 |
SFR87248.1 | SFS17251.1 | SAMN05216568_101339 | SAMN05216568_104477 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
SFR87248.1 | SFS20613.1 | SAMN05216568_101339 | SAMN05216568_106283 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
SFR87248.1 | SFS20709.1 | SAMN05216568_101339 | SAMN05216568_106326 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Putative two-component system response regulator. | 0.964 |
SFR87248.1 | SFS21674.1 | SAMN05216568_101339 | SAMN05216568_107206 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.958 |
SFR87248.1 | SFS21844.1 | SAMN05216568_101339 | SAMN05216568_107255 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Putative two-component system response regulator. | 0.962 |
SFR87248.1 | SFS22813.1 | SAMN05216568_101339 | SAMN05216568_11052 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.760 |
SFR87248.1 | SFS23699.1 | SAMN05216568_101339 | SAMN05216568_11722 | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.955 |
SFS11376.1 | SFR87248.1 | SAMN05216568_103257 | SAMN05216568_101339 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.991 |
SFS11376.1 | SFS17181.1 | SAMN05216568_103257 | SAMN05216568_104463 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.995 |
SFS11376.1 | SFS17246.1 | SAMN05216568_103257 | SAMN05216568_104476 | PAS domain S-box-containing protein. | Response regulator receiver modulated diguanylate cyclase/phosphodiesterase. | 0.999 |
SFS11376.1 | SFS17251.1 | SAMN05216568_103257 | SAMN05216568_104477 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SFS11376.1 | SFS20613.1 | SAMN05216568_103257 | SAMN05216568_106283 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SFS11376.1 | SFS20709.1 | SAMN05216568_103257 | SAMN05216568_106326 | PAS domain S-box-containing protein. | Putative two-component system response regulator. | 0.999 |
SFS11376.1 | SFS21674.1 | SAMN05216568_103257 | SAMN05216568_107206 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
SFS11376.1 | SFS21844.1 | SAMN05216568_103257 | SAMN05216568_107255 | PAS domain S-box-containing protein. | Putative two-component system response regulator. | 0.998 |
SFS11376.1 | SFS22813.1 | SAMN05216568_103257 | SAMN05216568_11052 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.991 |
SFS11376.1 | SFS23699.1 | SAMN05216568_103257 | SAMN05216568_11722 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.916 |
page 1 of 6