STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS23717.1PTS system, mannose-specific IIA component. (147 aa)    
Predicted Functional Partners:
SFS23719.1
PTS system, D-glucosaminate-specific IIC component.
 
 0.981
SFS23720.1
PTS system, D-glucosaminate-specific IID component.
 
 0.980
SFS23718.1
PTS system sorbose subfamily IIB component.
 
 
 0.979
SFR90151.1
PTS system, N-acetylgalactosamine-specific IIC component.
 
 0.944
SFS16607.1
PTS system, D-glucosaminate-specific IIC component.
 
 0.944
SFR90165.1
PTS system IID component, Man family.
 
 0.942
SFS02546.1
PTS system IIC component, Man family.
 
 0.942
SFS16615.1
PTS system IID component, Man family.
 
 0.942
SFS23615.1
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID.
 
 0.942
SFS21126.1
PTS system IID component, Man family.
 
 0.940
Your Current Organism:
Clostridium citroniae
NCBI taxonomy Id: 358743
Other names: CCUG 52203, Clostridium citroniae Warren et al. 2007, DSM 19261, [. citroniae, [Clostridium] citroniae, strain RMA 16102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.