STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_02410Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
DF19_02405
glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
DF19_35205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
DF19_16305
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
DF19_11745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
DF19_33805
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
DF19_15315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
DF19_39020
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.654
DF19_00730
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
DF19_05535
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
DF19_02750
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.572
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.