Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DF19_02435Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
DF19_02445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.985
DF19_25135
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.917
DF19_02440
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.864
DF19_39665
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.849
DF19_05330
Binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.818
DF19_37120
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.808
DF19_27280
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.793
DF19_35195
3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.786
DF19_41870
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.781
DF19_41950
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.781
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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