Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DF19_02440Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)    
Predicted Functional Partners:
DF19_02435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.864
DF19_02445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.864
DF19_02450
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.504
DF19_02460
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.500
DF19_02430
Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.485
DF19_02465
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.482
DF19_02455
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.458
DF19_02470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
DF19_02425
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.403
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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