STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_02605Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)    
Predicted Functional Partners:
DF19_02595
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.771
DF19_05345
rRNA cytosine-C5-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.725
DF19_16060
NAD+ synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.702
DF19_26555
Molybdopterin biosynthesis protein MoeE; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.690
DF19_03275
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
DF19_28060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
DF19_37390
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.622
DF19_16485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
DF19_15105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
DF19_39605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.588
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.