STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_03085Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (214 aa)    
Predicted Functional Partners:
DF19_31880
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.958
DF19_35395
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.872
DF19_31295
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.869
DF19_15300
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.857
DF19_05710
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.855
DF19_29475
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.853
DF19_30635
Beta-fructosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.827
DF19_34715
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.801
DF19_14540
Glycoside hydrolase family 97; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.791
DF19_05410
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.773
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.