STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_03095Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)    
Predicted Functional Partners:
DF19_06770
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.755
DF19_03090
Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.711
DF19_15520
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
DF19_03060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_03065
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_03100
Anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
ppnK
Inorganic polyphosphate kinase; Catalyzes the phosphorylation of NAD to NADP; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.547
DF19_21360
NADH-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.536
DF19_01680
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.525
DF19_06215
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.516
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.