STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_03120prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (185 aa)    
Predicted Functional Partners:
DF19_03115
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.821
DF19_33445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.752
DF19_03110
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.748
DF19_09515
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.702
DF19_03100
Anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_03105
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_02480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.446
DF19_27485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.446
DF19_00700
Electron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.410
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.