STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_03340Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)    
Predicted Functional Partners:
DF19_03370
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.753
DF19_03350
beta-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.655
DF19_03355
Polyketide beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.637
DF19_03345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.626
DF19_27965
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.559
DF19_03360
Curamycin polyketide synthase acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
DF19_03365
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.550
DF19_03330
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
DF19_03335
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.442
DF19_13485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.435
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.