STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_03355Polyketide beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)    
Predicted Functional Partners:
DF19_03350
beta-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.998
DF19_41515
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
DF19_21900
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.995
DF19_23525
beta-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.995
DF19_27985
beta-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.995
DF19_15335
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
DF19_21895
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
DF19_13900
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.992
DF19_15320
FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.991
DF19_12070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.