Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DF19_03425Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)    
Predicted Functional Partners:
DF19_03430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
DF19_03420
Cholesterol esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.893
DF19_27915
Cholesterol esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
DF19_35580
Cholesterol esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.787
DF19_27905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.716
DF19_03885
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
DF19_32190
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
DF19_24435
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.429
DF19_08990
Multi-component regulatory system-4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.423
DF19_18935
Multi-component regulatory system-4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.423
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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