Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DF19_03465IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)    
Predicted Functional Partners:
DF19_05600
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.851
DF19_28860
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
DF19_33440
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
DF19_07460
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
DF19_17230
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.651
DF19_41515
acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.651
DF19_32505
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.624
DF19_18400
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
DF19_03470
Gluconate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.520
DF19_05595
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.512
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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