Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gudDGlucarate dehydratase; Catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)    
Predicted Functional Partners:
DF19_12895
5-dehydro-4-deoxyglucarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.854
DF19_00345
5-dehydro-4-deoxyglucarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.852
DF19_42485
5-dehydro-4-deoxyglucarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
DF19_13425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.766
DF19_37865
Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.721
DF19_22615
Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.704
DF19_03470
Gluconate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.698
DF19_40850
Galactonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.696
DF19_21905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.656
DF19_13905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.652
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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