STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_03485Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)    
Predicted Functional Partners:
DF19_03495
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
DF19_03490
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.986
DF19_27840
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
DF19_36875
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
DF19_31690
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.977
DF19_09435
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
DF19_35405
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.974
DF19_35090
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.967
DF19_07040
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.964
DF19_07050
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.964
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.