Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DF19_04595Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (747 aa)    
Predicted Functional Partners:
DF19_06770
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.957
DF19_25905
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.867
DF19_40185
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.855
DF19_35305
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.850
DF19_17230
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.844
DF19_01365
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.841
DF19_25900
Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.831
DF19_23295
Fumarate hydratase; Catalyzes the formation of malate from fumerate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.813
DF19_17015
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.808
DF19_32685
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.772
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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