STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_04595Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (747 aa)    
Predicted Functional Partners:
DF19_25905
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.974
DF19_01365
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.958
DF19_06770
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.955
DF19_40185
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.952
DF19_35305
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.907
DF19_25900
Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.896
DF19_40455
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.894
DF19_17230
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.853
DF19_03045
Elongation factor Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.833
DF19_08315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.833
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.