STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_06005Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)    
Predicted Functional Partners:
DF19_06010
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.816
DF19_06000
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
DF19_33235
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.697
DF19_40460
Sphingosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.693
DF19_21515
Nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.509
DF19_14545
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
DF19_40370
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
DF19_09360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
DF19_39725
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
DF19_32680
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.406
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.