STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_06780Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)    
Predicted Functional Partners:
DF19_06765
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
DF19_15040
Molybdopterin-guanine dinucleotide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
DF19_06775
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.977
DF19_06770
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.945
DF19_03790
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.942
DF19_01170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.908
DF19_21295
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.907
DF19_25940
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.894
DF19_42005
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.891
DF19_06760
2-dehydropantoate 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.880
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.