STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_06830SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
DF19_13905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.845
DF19_06825
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.810
DF19_12070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.802
DF19_13890
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.785
DF19_04240
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.783
DF19_21220
Sarcosine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.754
DF19_21905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.735
DF19_20520
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.705
DF19_20530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.705
DF19_02765
Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.683
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.