STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_07155FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)    
Predicted Functional Partners:
DF19_11295
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.789
DF19_13905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.750
DF19_21905
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.734
DF19_03370
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.705
DF19_27965
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.705
DF19_06770
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.702
DF19_01965
Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.657
DF19_29330
Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.637
DF19_09610
C-5 sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.636
DF19_07160
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.629
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.