STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_07915Glucoamylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)    
Predicted Functional Partners:
DF19_36990
Alpha,alpha-trehalose-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.936
DF19_36985
Trehalose phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.845
DF19_35645
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.828
DF19_03580
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.724
DF19_16170
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.724
DF19_27755
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.724
DF19_30505
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.723
DF19_35675
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.684
DF19_19230
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.655
DF19_29770
Trehalose 6-phosphate phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.655
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.