STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_07960Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)    
Predicted Functional Partners:
DF19_07995
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.992
DF19_07955
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
DF19_08005
GTP-binding protein EngA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.987
DF19_07950
Chromosome segregation protein ScpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.948
DF19_33620
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.873
DF19_38275
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.873
DF19_07940
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.857
DF19_07945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.857
DF19_07965
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
DF19_07970
Crystallin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.