STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_08085Cell division protein SepF; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)    
Predicted Functional Partners:
DF19_01650
Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.997
DF19_01640
Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.857
DF19_01630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.856
DF19_01655
Cell division protein FtsQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.792
DF19_39075
Plasmid partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.731
DF19_08090
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
DF19_01620
Cell division protein DivIVA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.709
DF19_01910
Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.708
DF19_11190
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.685
DF19_00730
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.607
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.