STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_08090Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
DF19_08085
Cell division protein SepF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.730
DF19_32720
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.656
DF19_15585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
DF19_33650
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
DF19_42515
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
DF19_09230
Streptogrisin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_09225
Streptogrisin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
DF19_34805
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.494
DF19_26140
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
DF19_16885
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.457
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.