STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_08095Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)    
Predicted Functional Partners:
DF19_07375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.897
DF19_17775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.890
DF19_12850
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.646
DF19_08100
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.508
DF19_37295
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.453
DF19_06170
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.407
DF19_12380
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.407
DF19_28900
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.407
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.