Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
DF19_09080Deaminase/reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)    
Predicted Functional Partners:
DF19_21220
Sarcosine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.784
DF19_30955
5-amino-6-(5-phosphoribosylamino)uracil reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.784
DF19_40325
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.777
DF19_02765
Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.771
DF19_09930
Dihydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.762
DF19_03710
Glycine cleavage system protein H; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.746
DF19_03715
Glycine cleavage system protein T; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.743
DF19_09915
ATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.651
DF19_24035
Deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.607
DF19_02215
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.590
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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