STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_09355Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (682 aa)    
Predicted Functional Partners:
DF19_09350
Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.970
DF19_09360
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.945
DF19_11180
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.905
DF19_05440
3,4-dihydroxy-2-butanone 4-phosphate synthase; Bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.830
DF19_12320
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.822
DF19_09370
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.746
DF19_09365
RNA polymerase sigma factor SigK; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.697
DF19_09375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.656
DF19_04310
Preprotein translocase subunit SecD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.649
DF19_11255
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.610
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.