STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_09660Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
DF19_09655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
DF19_09665
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.751
DF19_09770
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.580
DF19_26670
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
DF19_09670
tyrosyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_32720
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
DF19_01445
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
DF19_15085
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
DF19_23780
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.504
DF19_15105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.496
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.