STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_09720Phosphohistidine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)    
Predicted Functional Partners:
DF19_36785
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.813
DF19_09715
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.801
DF19_17745
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.739
DF19_00720
Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.716
DF19_10805
Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.716
DF19_15815
Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.705
DF19_39605
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.698
DF19_09705
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.684
DF19_09400
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.658
DF19_09700
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.656
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.