Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DF19_10080Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)    
Predicted Functional Partners:
DF19_30655
Levanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.939
DF19_33505
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.919
DF19_10090
Levansucrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.855
DF19_25540
Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.824
DF19_30635
Beta-fructosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.778
DF19_28335
PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.722
DF19_34970
Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.709
DF19_05730
PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.707
DF19_16170
Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.667
DF19_00765
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.664
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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