Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DF19_10285Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)    
Predicted Functional Partners:
DF19_10290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
DF19_00560
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.743
DF19_12070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.721
DF19_30370
Chromosome replication initiation inhibitor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.707
DF19_20525
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.700
DF19_04330
NAD-dependent protein deacetylase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.690
DF19_38060
NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.690
DF19_05515
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.688
DF19_04240
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.686
DF19_10690
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.674
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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