STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_10285Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)    
Predicted Functional Partners:
DF19_30370
Chromosome replication initiation inhibitor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.803
DF19_00560
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.802
DF19_10290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
DF19_04330
NAD-dependent protein deacetylase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.749
DF19_38060
NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.749
DF19_05515
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.731
DF19_10690
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.676
DF19_20845
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.676
DF19_29270
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.635
DF19_38805
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.635
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.