STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_17340NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
DF19_17345
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
DF19_21825
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.770
DF19_28780
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.717
DF19_31510
Pyruvate dehydrogenase; Catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.698
DF19_34930
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.698
DF19_37720
Thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.698
DF19_04835
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.614
DF19_02600
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.603
DF19_14735
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.603
DF19_32980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.577
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.