STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_17855Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)    
Predicted Functional Partners:
DF19_05200
alanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.950
DF19_11180
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.932
DF19_29805
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.931
DF19_40085
Ubiquitin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.929
DF19_10705
Transcription accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.923
DF19_17650
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.914
DF19_18315
Heat shock protein 90; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.911
DF19_31930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.909
DF19_33840
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.909
DF19_13490
Heat shock protein 90; Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.898
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.