STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_19745Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)    
Predicted Functional Partners:
DF19_19750
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.830
DF19_17230
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.766
DF19_19755
Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.728
DF19_19760
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.674
DF19_06770
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.632
DF19_19730
Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_21915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.554
DF19_41955
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.541
DF19_12325
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.495
DF19_14015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.495
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.