STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_21675Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)    
Predicted Functional Partners:
DF19_12015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.952
DF19_11180
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.894
DF19_15855
PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.860
DF19_25350
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.859
DF19_30615
PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.858
DF19_39915
PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.856
DF19_19685
PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.854
DF19_23635
PAS/PAC sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.808
DF19_39465
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.801
DF19_02250
Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.792
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.