STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_22335Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)    
Predicted Functional Partners:
DF19_22330
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.759
DF19_22340
Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.758
DF19_22325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
DF19_22350
Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
DF19_22355
Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
DF19_22320
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.743
DF19_37430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
DF19_16920
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.581
DF19_34625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
DF19_32680
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.547
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.