STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_25540Xylose isomerase; Catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
DF19_25535
Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
DF19_41930
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
DF19_33505
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.968
DF19_07060
Erythritol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.952
DF19_25530
ROK family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.941
DF19_15200
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.911
DF19_19680
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.909
DF19_13190
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.907
DF19_25770
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.907
DF19_36970
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.907
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.