STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_33325Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)    
Predicted Functional Partners:
DF19_33315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.950
DF19_33320
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.940
DF19_33310
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.924
DF19_33335
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.726
DF19_40480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
DF19_25450
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
DF19_34805
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.559
DF19_01030
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
DF19_30160
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
DF19_15690
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.