STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_36455Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)    
Predicted Functional Partners:
DF19_12015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.999
DF19_36450
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
DF19_11180
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.997
DF19_42570
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.992
DF19_16640
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
DF19_25865
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.929
DF19_06770
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.924
DF19_11740
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.913
DF19_38495
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.912
DF19_16635
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.907
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.