STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_39775Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
DF19_39780
Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.899
DF19_39785
Antitermination regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.805
DF19_39790
Antitermination regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.636
DF19_39805
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.623
DF19_21825
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.560
DF19_01270
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_39810
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
DF19_04145
NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.544
DF19_16335
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.544
DF19_19760
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.