STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DF19_40935Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)    
Predicted Functional Partners:
DF19_40920
N-acetyl-gamma-glutamyl-phosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
DF19_40925
N-acetylglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
DF19_40930
Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
DF19_40975
Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
DF19_40940
Regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.991
DF19_32060
Catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
DF19_42695
Catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.978
DF19_31730
Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.974
DF19_01775
N-acetylglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.926
DF19_00505
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.922
Your Current Organism:
Streptomyces olindensis
NCBI taxonomy Id: 358823
Other names: S. olindensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.