AQS62359.1 protein (Agrobacterium rhizogenes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, LMG:150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQS62359.1	AQS62360.1	B0909_08980	B0909_08985	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AQS62359.1	AQS62361.1	B0909_08980	B0909_08990	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Proline/glycine betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
AQS62359.1	AQS64119.1	B0909_08980	B0909_17530	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AQS62359.1	AQS64120.1	B0909_08980	B0909_17535	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AQS62359.1	AQS64121.1	B0909_08980	B0909_17540	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Proline/glycine betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
AQS62359.1	AQS64199.1	B0909_08980	B0909_18000	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
AQS62359.1	AQS64200.1	B0909_08980	B0909_18005	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
AQS62359.1	AQS64226.1	B0909_08980	B0909_18150	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AQS62359.1	ChoX	B0909_08980	B0909_01665	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AQS62359.1	ChoX-2	B0909_08980	B0909_14270	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AQS62360.1	AQS62359.1	B0909_08985	B0909_08980	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AQS62360.1	AQS62361.1	B0909_08985	B0909_08990	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Proline/glycine betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AQS62360.1	AQS64119.1	B0909_08985	B0909_17530	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
AQS62360.1	AQS64120.1	B0909_08985	B0909_17535	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AQS62360.1	AQS64121.1	B0909_08985	B0909_17540	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Proline/glycine betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AQS62360.1	AQS64199.1	B0909_08985	B0909_18000	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
AQS62360.1	AQS64200.1	B0909_08985	B0909_18005	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
AQS62360.1	AQS64226.1	B0909_08985	B0909_18150	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
AQS62360.1	ChoX	B0909_08985	B0909_01665	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AQS62360.1	ChoX-2	B0909_08985	B0909_14270	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978

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